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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs8052287 chr16:67865073 C/T 1.73E-7 407 15.32 17.67 6.1 KM Plot
LGG rs8052655 chr16:67409180 G/A 5.99E-5 407 15.25 15.17 16.55 KM Plot
LGG rs8053264 chr16:67424693 T/C 6.24E-5 406 15.25 16.42 16.55 KM Plot
LGG rs8054034 chr16:67773652 C/A 2.16E-11 407 15.17 18.37 6.47 KM Plot
LGG rs8055190 chr16:67391618 C/T 8.24E-5 407 15.2 16.42 16.55 KM Plot
LGG rs8056260 chr16:67476572 A/G 9.13E-6 406 15.2 15.25 19.2 KM Plot
LGG rs8057016 chr16:72046211 G/T 1.81E-8 407 15.33 15.07 6.63 KM Plot
LGG rs8058214 chr16:72046305 A/C 1.81E-8 407 15.25 16.03 6.63 KM Plot
LGG rs8058310 chr16:67893839 G/A 2.16E-11 407 15.17 18.37 6.47 KM Plot
LGG rs8058835 chr16:67814865 C/T 2.16E-11 407 15.17 18.37 6.47 KM Plot
LGG rs8061140 chr16:72046461 A/G 1.81E-8 407 15.25 16.03 6.63 KM Plot
LGG rs8061384 chr16:67911874 T/G 2.16E-11 407 15.17 18.37 6.47 KM Plot
LGG rs8064110 chr16:67396875 A/G 6.04E-5 406 15.25 16.42 16.55 KM Plot
LGG rs8087483 chr18:20915791 C/T 8.56E-5 401 15.93 13.65 5.53 KM Plot
LGG rs8123363 chr20:37251162 A/G 1.51E-7 407 6.83 13.12 15.78 KM Plot